Tag Archives: protein

Molecular Spectroscopy Tracks Living Mammalian Cells in Real Time as They Differentiate

By Guest PostMay 2, 2012Scienceals, alzheimer's disease, amino acid residues, apoptosis, bacteria, berkeley lab, carbohydrates, cell change, cell death, children, diabetes, fibroblasts, fluorescent dyes, fourier transform infrared, ftir, function, hans bechtel, hoi ying, hyperspectromicroscopy, ir, kevin loutherback, liang chen, lipids, macular degeneration, michael martin, mitochondrial diseases, pc12, phosphorylation, phosphorylation process, power plant, protein, rafael gomez sjoberg, retina, san diego, serine, spectromicroscopy, threonine, tyrosine, ultraviolet, university of california, zhao hao

Berkeley Lab scientists demonstrate the promise of synchrotron infrared spectroscopy of living cells for medical applications

Knowing how a living cell works means knowing how the chemistry inside the cell changes as the functions of the cell change. Protein phosphorylation, for example, controls everything from cell proliferation to differentiation to metabolism to signaling, and even programmed cell death (apoptosis), in cells from bacteria to humans. It’s a chemical process that has long been intensively studied, not least in hopes of treating or eliminating a wide range of diseases. But until now the close-up view – watching phosphorylation work at the molecular level as individual cells change over time – has been impossible without damaging the cells or interfering with the very processes that are being examined.

“To look into phosphorylation, researchers have labeled specific phosphorylated proteins with antibodies that carry fluorescent dyes,” says Hoi-Ying Holman of the U.S. Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab). “That gives you a great image, but you have to know exactly what to label before you can even begin.” (more…)

Locked RNA Editing Yields Odd Fly Behavior

By Guest PostApril 26, 2012Scienceabiotic factor, als, arthur sugden, asli sahin, brown university, cell, charles lawrence, dadar, enzyme adar, epilepsy, factor, fruit fly, function, genetic, jacquelyn dorsky, james jepson, lauren alpert, locking down, lou gehrigs disease, nucleus, organism, phenomenon, protein, rna, robert reenan, suicidal depression, temperature, wallflowers, yiannis savva

At the level of proteins, organisms can adapt by editing their RNA — and an editor can even edit itself. Brown University scientists working with fruit flies found that “locking down” the self-editing process at two extremes created some strange behaviors. They also found that the process is significantly affected by temperature.

PROVIDENCE, R.I. [Brown University] — Because a function of RNA is to be translated as the genetic instructions for the protein-making machinery of cells, RNA editing is the body’s way of fine-tuning the proteins it produces, allowing us to adapt. The enzyme ADAR, which does this editing job in the nervous system of creatures ranging from mice to men, even edits itself. In a new study that examined the self-editing process and locked it down at two extremes in fruit flies, Brown University scientists found some surprising insights into how this “fine-tuning of the fine-tuner” happens, including bizarre behavioral effects that come about when the self-editor can’t edit. (more…)

Inspired by Insects

By Guest PostApril 25, 2012Sciencebioactive hydrogel matrices, biomimetic, cell adhesion, cicadas, degradation, elastic, frequency, gel, grasshopper, hmscs, human mesenchymal stem cells, kristi kiick, microsecond, multipotent cells, phonation, polypeptide hydrogel, protein, radio wave, regenerative power, resilin, speak, susan thibeault, timothy mcculloch, tissue, torsional wave apparatus, united states, university of delaware, vibratory stimulation, vocal folds, voice problem, words, xinqiao jia

For treatment of vocal fold disorders, UD researchers look to insect protein

A one-inch long grasshopper can leap a distance of about 20 inches. Cicadas can produce sound at about the same frequency as radio waves. Fleas measuring only millimeters can jump an astonishing 100 times their height in microseconds. How do they do it? They make use of a naturally occurring protein called resilin.

Resilin is a protein in the composite structures found in the leg and wing joints, and sound producing organs of insects. Highly elastic, it responds to exceptionally high rates of speed and demonstrates unmatched resilience after being stretched or deformed. (more…)

First Atomic-Scale Real-Time Movies of Platinum Nanocrystal Growth in Liquids

By Guest PostApril 23, 2012Sciencealex zettl, alivisatos zettl collaboration, anisotropic particle, atomic scale, berkeley lab, crystallographic direction, daniel hellebusch, DNA, electron beam, electron microscope, gold tem mesh, grapheme, graphene liquid cells, growth, growth trajectory, jeong yong lee, jong min yuk, jungwon park, kwanpyo kim, liquid, lynn yarris, membrane, metal, michael crommie, movie, nanocrystal, nanometer scale, nanoparticle growth, ncem, paul alivisatos, peter ercius, platinum nanocrystal, protein, real-time, solution, subnanometer resolution, tem grid, transmission electron microscope, university of california

Berkeley Scientists Create Graphene Liquid Cells for Electron Microscopy Studies of Nanocrystal Formation

They won’t be coming soon to a multiplex near you, but movies showing the growth of platinum nanocrystals at the atomic-scale in real-time have blockbuster potential. A team of scientists with the Lawrence Berkeley National Laboratory (Berkeley Lab) and the University of California (UC) Berkeley has developed a technique for encapsulating liquids of nanocrystals between layers of graphene so that chemical reactions in the liquids can be imaged with an electron microscope. With this technique, movies can be made that provide unprecedented direct observations of physical, chemical and biological phenomena that take place in liquids on the nanometer scale. (more…)

Can Inflammation Predict Heart Disease and Stroke?

By Guest PostApril 7, 2012Healthanti inflammatory medication, asthma, blood clots, blood test, c reactive protein, cardiovascular disease, cholesterol, chronic inflammation, crp, disease, heart attack, heart disease, inflammation, protein, stroke

Can Inflammation Predict Heart Disease and Stroke?

Groundbreaking research may be able to help predict how likely it is that a person will have heart disease or a stroke in the future. Studies have linked inflammation to the risk of cardiovascular disease because of the association between the release of C-Reactive Protein (CRP) and heart disease.

What is C-Reactive Protein (CRP)?

The National Institute of Health explains that CRP is a protein that is released when there is inflammation present in the body. The liver produces the protein and a blood test can be done to find out how much CRP is present in a person’s body.

What is inflammation?

John W. Kimball maintains a website describing in depth how inflammation develops in the body. Inflammation develops as a result of injury to the body. It can often be recognized by swelling and redness at the site of inflammation and may be accompanied by pain. Although inflammation often occurs on the surface of the skin, it can also occur internally. (more…)

Scientists Identify Novel Pathway for T Cell Activation in Leprosy

By Guest PostApril 2, 2012Sciencecell signaling molecule, delphine j lee, dendritic cells, immune cells, infection, interleukin 32, lepromatous leprosy, leprosy, leprosy pathogen, mirjam schenk, monocytes, mycobacteria, mycobacterium leprae, nod2, peter a sieling, protein, robert modlin, skin, stephan r krutzik, t cells, tlr2, tuberloid leprosy, white blood cell

*Findings may help lead to new treatments for infectious diseases, cancer*

UCLA researchers have pinpointed a new mechanism that potently activates T cells, the group of white blood cells that plays a major role in fighting infections.

The team specifically studied how dendritic cells, immune cells located at the site of an infection, become more specialized to fight the leprosy pathogen known as Mycobacterium leprae. Dendritic cells, like scouts in the field of a military operation, deliver key information about an invading pathogen that helps activate the T cells in launching a more effective attack. (more…)

Newly Found Protein Helps Cells Build Tissues

By Guest PostApril 2, 2012Scienceantibody, bmps, bone morphogenic proteins, brown university, enzyme, fruit flies, gbb, gbb38, glass bottom boat, guillermo marques, kristi wharton, molecule, protein, signaling molecule, takuya akiyama, wing tissue

University biologists have found a new molecule in fruit flies that is key to the information exchange needed to build wings properly. They have also uncovered evidence that an analogous protein may exist in people and may be associated with problems such as cleft lip, or premature ovarian failure.

PROVIDENCE, R.I. [Brown University] — As they work together to form body parts, cells in developing organisms communicate like workers at a construction site. The discovery of a new signaling molecule in flies by Brown University biologists not only helps explain how cells send many long-haul messages, but also provides new clues for researchers who study how human development goes awry, for instance in cases of cleft lip and palate. (more…)

Tiny Reader Makes Fast, Cheap DNA Sequencing Feasible

By Guest PostMarch 29, 2012Scienceaddiction, adenine, andrew laszlo, cancer, cytosine, diabetes, dna molecule, dna sequencing, elizabeth manrao, enzyme, guanine, ian derrington, jens gundlach, kyle langford, matthew hopper, millisecond, molecular motor, mycobacterium, nanopore, nanoscale sensor, nathaniel gillgren, nucleotide, protein, thymine

Researchers have devised a nanoscale sensor to electronically read the sequence of a single DNA molecule, a technique that is fast and inexpensive and could make DNA sequencing widely available.

The technique could lead to affordable personalized medicine, potentially revealing predispositions for afflictions such as cancer, diabetes or addiction. (more…)