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Microbes in the Mississippi

By Guest PostAugust 5, 2012Environment, Sciencebacteria, bank, barcoded, christopher staley, dna analysis, e coli, fecal indicator bacterium, genetic information, human population, la crescent, lake, lake itasca, m3p, m3p students, mercury, michael sadowsky, microbe, microbial life, microorganisms, minnesota, Mississippi, mississippi river, river, st croix, trevor gould, twin cities, university of minnesota, zumbro

Professor and students study how microbial life changes along the river

The mercury is pushing 100, but professor Michael Sadowsky and two assistants leave the indoor coolness for the bank of the Mississippi River as it flows by the University of Minnesota Twin Cities campus.

The three men send a bucket splashing into the current and haul back a water sample. That doesn’t affect the river much, but information locked away in bacteria from the sample may tell them a great deal about how the river’s microbial communities change along its course through Minnesota and how human activity affects them. (more…)

Study Provides New Insights into Antibiotics and Pig Feeds

By Guest PostJanuary 19, 2012Scienceabundance, antibiotic resistant gene, antibiotics, benli chai, chickens, diversity, e coli, farm animals, feed efficiency, gastrointestinal microbes, gastrointestinal tract, growth rates, in feed antibiotic, intestinal microbial communities, james tiedje, kurt stepnitz, livestock, michigan state university, pig feed, population, robert stedtfeld, tiffany stedtfeld, tim johnson, woo jun sul

EAST LANSING, Mich. — Antibiotics in pig feed increased the number of antibiotic resistant genes in gastrointestinal microbes in pigs, according to a study conducted by Michigan State University and the U.S. Department of Agriculture’s Agricultural Research Service.

Published in the current edition of the Proceedings of the National Academy of Sciences, the comprehensive study focused on understanding the effects of conventional, in-feed antibiotics in U.S. farms. (more…)

CAD for RNA

By Guest PostDecember 27, 2011Scienceaptazyme, biodegradable plastics, biofuels, biological systems, cad, cad platforms, cad type models, cells, computer assisted design, control systems, darmawi juminaga, diabetes, e coli, escherichia coli bacterium, genetic circuits, genetic expression, james carothers, jay keasling, jbei, jonathan goler, lignocellulosic biomass, microbes, microbial fuel production, molecules, parkinson, petrochemicals, ribozyme, rna devices, rna functions, rna molecules, simulations, synberc, synthetic biology, tools, university of california

*Joint BioEnergy Institute Researchers Develop CAD-Type Tools for Engineering RNA Control Systems*

The computer assisted design (CAD) tools that made it possible to fabricate integrated circuits with millions of transistors may soon be coming to the biological sciences. Researchers at the U.S. Department of Energy (DOE)’s Joint BioEnergy Institute (JBEI) have developed CAD-type models and simulations for RNA molecules that make it possible to engineer biological components or “RNA devices” for controlling genetic expression in microbes. This holds enormous potential for microbial-based sustainable production of advanced biofuels, biodegradable plastics, therapeutic drugs and a host of other goods now derived from petrochemicals. (more…)

Manufacturing Goes Viral

By Guest PostOctober 22, 2011Sciencealzheimer, amyloid aggregation in our brain tissues, bacteria hunting virus, berkeley laboratory, bioengineering laboratories, biological helical nanofiber structures, biological tissues in nature, biomimetic, chiral materials, chiral strands, coax viruses, collagens for animals and celluloses for plants, corneas, e coli, Environment, environmental variables, escherichia coli, filamentous viruses, helical ribbons, hierarchical level of complexity, induce polarization, joseph akkara, m13, m13 phages, macroscale structures, national science foundation, Nature, periodic changes in cell activity, physical environment, ramen noodle like, range of the spectrum, seung wuk lee, skin, skin tissue, structural building blocks for materials, substrate, supramolecular structures, synthetics with microstructures, teeth, tissue regeneration and repair, university of california at berkeley, wavelengths, wavy, woo jae chung, zina deretsky

*Researchers coax viruses to assemble into synthetics with microstructures and properties akin to those of corneas, teeth and skin*

Using a simple, single-step process, engineers and scientists at the University of California at Berkeley recently developed a technique to direct benign, filamentous viruses called M13 phages to serve as structural building blocks for materials with a wide range of properties.

By controlling the physical environment alone, the researchers caused the viruses to self-assemble into hierarchically organized thin-film structures, with complexity that ranged from simple ridges, to wavy, chiral strands, to truly sophisticated patterns of overlapping strings of material–results that may also shed light on the self-assembly of biological tissues in nature. (more…)

Study: Consumers Value Safer Food More Than Current Analyses Suggest

By Guest PostFebruary 9, 2011Economy, Healthassess the value, brian roe, consumer behavior, contamination, cost benefit analyses, cost of illness, deaths, e coli, eat bad food, economic model, food borne illnesses, food safety, government regulators, hamburger, hypothetical scenarios, kidney damage, mario teisl, pathogen, predict, roe and teisl, shiga toxin, usda

COLUMBUS, Ohio – Government regulators could more realistically assess the value of improving food safety if they considered the fact that consumers typically want to avoid getting sick – even if it means they have to pay a little extra for safer food, researchers say.

In the world of food regulation, cost-benefit analyses are a primary tool for assessing the societal benefits of mandating more stringent – and more expensive – processing practices. In most cases, regulators determine a dollar value associated with pursuing new rules by estimating how many illnesses and deaths the safer processing would prevent. (more…)

Bacteria Make Thrift a Habit

By Guest PostAugust 26, 2010Scienceamino acids, bacteria, bacterial protein, bacterium, balance function, curli, daniel smith, e coli, economic cost, escherichia coli, fibers, flagellu, glycine, illness, matthew chapman, mbio, metabolic, microbes, proteins, smith and chapman, ssga, university of michigan

ANN ARBOR, Mich.— In these lean times, smart consumers refuse to pay a lot for throwaway items, but will shell out a little more for products that can be used again and again. The same is true of bacteria and other microbes, researchers at the University of Michigan have learned.

(more…)

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