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Reading the Human Genome

By Guest PostMarch 10, 2013Scienceautomated data collection, berkeley lab, biomolecular machinery, biophysicist eva nogales, cellular process, central dogma, cryo electron microscopy, cryo em, DNA, dna promoter complex, dylan taatjes, gene sequence, genetic information, human genome, jie fang, malfunctions, molecular biology, paula flicker, pre initiation complex, rna, rna polymerase, rna transcription, structural data, tata binding protein, tbp, transcription, transcription factors, yuan he

Berkeley Lab Researchers Produce First Step-by-Step Look at Transcription Initiation

Researchers with the U.S. Department of Energy (DOE)’s Lawrence Berkeley National Laboratory (Berkeley Lab) have achieved a major advance in understanding how genetic information is transcribed from DNA to RNA by providing the first step-by-step look at the biomolecular machinery that reads the human genome.

“We’ve provided a series of snapshots that shows how the genome is read one gene at a time,” says biophysicist Eva Nogales who led this research. “For the genetic code to be transcribed into messenger RNA, the DNA double helix has to be opened and the strand of gene sequences has to be properly positioned so that RNA polymerase, the enzyme that catalyzes transcription, knows where the gene starts. The electron microscopy images we produced show how this is done.” (more…)

New Information on the Waste-Disposal Units of Living Cells

By Guest PostJanuary 15, 2012Scienceandreas martin, base, berkeley lab, biochemical processes, cellular proteins, charlene bashore, degradation, degrade, diseases, dna repair, eric estrin, eva nogales, gabriel lander, heterologous expression system, human cell, immune defense system, irreversible, kiss of death, lid, living cells, mary matyskiela, non atpase proteins, polypeptide, proteasome machinery, proteasome regulatory particle, proteasomes, protein functions, protein machines, regulatory particle, subnanometer scale, transcription, treatment of cancer, ubiquitin, university of california, waste disposal, yeast

*Berkeley Researchers Provide Detailed Look at Proteasome’s Regulatory Particle*

Important new information on one of the most critical protein machines in living cells has been reported by a team of researchers with the U.S. Department of Energy’s Lawrence Berkeley National Laboratory (Berkeley Lab) and the University of California (UC) Berkeley. The researchers have provided the most detailed look ever at the “regulatory particle” used by the protein machines known as proteasomes to identify and degrade proteins that have been marked for destruction. The activities controlled by this regulatory particle are critical to the quality control of cellular proteins, as well as a broad range of vital biochemical processes, including transcription, DNA repair and the immune defense system. (more…)

Berkeley Lab Researchers Illuminate Laminin’s Role in Cancer Formation

By Guest PostMarch 8, 2011Sciencebreast, breast cancer, cancer death, cell, cytoplasmic protein, dna synthesis, dynamic reciprocity theory, epithelial cell quiescence, epithelial tissue, genetic information, laminin, laminin 111, matrix metalloproteinase 9, microenvironment of breast, mina bissell, mmp9, nucleus, protein, quiescence, stages of tumor development, transcription, united states, zinc dependent enzyme

Laminin, long thought to be only a structural support protein in the microenvironment of breast and other epithelial tissue, is “famous” for its cross-like shape. However, laminin is far more than just a support player with a “pretty face.” Two studies led by one of the world’s foremost breast cancer scientists have shown how laminin plays a central role in the development of breast cancer, the second most leading cause of cancer death among women in the United States. In one study it was shown how laminin influences the genetic information inside a cell’s nucleus. In the other study it was shown how destruction of laminin can play a detrimental role in the early stages of tumor development. (more…)

Tag Archives: transcription

Reading the Human Genome

New Information on the Waste-Disposal Units of Living Cells

Berkeley Lab Researchers Illuminate Laminin’s Role in Cancer Formation